Amphibine H

Common Name

Amphibine H Description

Amphibine H is found in fruits. Amphibine H is an alkaloid from the stem bark of Zizyphus jujuba (Chinese date) Amphibine h belongs to the family of Anisoles. These are organic compounds contaiing a methoxybenzene or a derivative thereof. Structure

MOLSDF3D-SDFPDBSMILESInChI View 3D Structure

Structure for HMDB29333 (Amphibine H)

Synonyms

Value Source 2-(dimethylamino)-N-[2-Methyl-1-[[3,3a,12,13,14,15,16,16a-octahydro-8-methoxy-13,16-dioxo-14-(phenylmethyl)-5,9-metheno-9H-pyrrolo[3,2-b][1,5,8]oxadiazacyclopentadecin-1(2H)-yl]carbonyl]propyl]propanamide, 9ciHMDB

Chemical Formlia

C33H43N5O6 Average Molecliar Weight

605.7244 Monoisotopic Molecliar Weight

605.321334133 IUPAC Name

(Z)-N-{1-[(8E,11E,13E)-10-benzyl-8,11-dihydroxy-16-methoxy-2-oxa-6,9,12-triazatricyclo[13.3.1.0³,⁷]nonadeca-1(18),8,11,13,15(19),16-hexaen-6-yl]-3-methyl-1-oxobutan-2-yl}-2-(dimethylamino)propimidic acid Traditional Name

(Z)-N-{1-[(8E,11E,13E)-10-benzyl-8,11-dihydroxy-16-methoxy-2-oxa-6,9,12-triazatricyclo[13.3.1.0³,⁷]nonadeca-1(18),8,11,13,15(19),16-hexaen-6-yl]-3-methyl-1-oxobutan-2-yl}-2-(dimethylamino)propimidic acid CAS Registry Number

52659-55-9 SMILES

COC1=CC=C2OC3CCN(C3C(O)=N/C(CC3=CC=CC=C3)C(O)=N/C=C/C1=C2)C(=O)C(N=C(/O)C(C)N(C)C)C(C)C

InChI Identifier

InChI=1S/C33H43N5O6/c1-20(2)28(36-30(39)21(3)37(4)5)33(42)38-17-15-27-29(38)32(41)35-25(18-22-10-8-7-9-11-22)31(40)34-16-14-23-19-24(44-27)12-13-26(23)43-6/h7-14,16,19-21,25,27-29H,15,17-18H2,1-6H3,(H,34,40)(H,35,41)(H,36,39)/b16-14+

InChI Key

KLYKBXVHBJWDJF-JQIJEIRASA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic acids and derivatives Sub Class

Carboxylic acids and derivatives Direct Parent

Oligopeptides Alternative Parents

  • Cyclic peptides
  • Valine and derivatives
  • Macrolactams
  • N-acyl-alpha amino acids and derivatives
  • Alpha amino acid amides
  • Alanine and derivatives
  • Anisoles
  • N-acylpyrrolidines
  • Alkyl aryl ethers
  • Benzene and substituted derivatives
  • Tertiary carboxylic acid amides
  • Lactams
  • Trialkylamines
  • Secondary carboxylic acid amides
  • Azacyclic compounds
  • Oxacyclic compounds
  • Hydrocarbon derivatives
  • Organopnictogen compounds
  • Carbonyl compounds
  • Organic oxides
  • Substituents

  • Alpha-oligopeptide
  • Cyclic alpha peptide
  • Valine or derivatives
  • Macrolactam
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Alanine or derivatives
  • Alpha-amino acid or derivatives
  • Anisole
  • N-acylpyrrolidine
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Amino acid or derivatives
  • Lactam
  • Carboxamide group
  • Tertiary aliphatic amine
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Ether
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic nitrogen compound
  • Organonitrogen compound
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point205 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.013 mg/mLALOGPS logP3.16ALOGPS logP1.99ChemAxon logS-4.7ALOGPS pKa (Strongest Acidic)4.56ChemAxon pKa (Strongest Basic)8.05ChemAxon Physiological Charge-2ChemAxon Hydrogen Acceptor Count10ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area139.78 Å2ChemAxon Rotatable Bond Count8ChemAxon Refractivity167.49 m3·mol-1ChemAxon Polarizability63.93 Å3ChemAxon Number of Rings4ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000394 KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29333 Metagene Link

    HMDB29333 METLIN ID

    Not Available PubChem Compound

    51029223 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: BI-9564

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 7608899

    Amphibine H

    Common Name

    Amphibine H Description

    Amphibine H is found in fruits. Amphibine H is an alkaloid from the stem bark of Zizyphus jujuba (Chinese date) Amphibine h belongs to the family of Anisoles. These are organic compounds contaiing a methoxybenzene or a derivative thereof. Structure

    MOLSDF3D-SDFPDBSMILESInChI View 3D Structure

    Structure for HMDB29333 (Amphibine H)

    Synonyms

    Value Source 2-(dimethylamino)-N-[2-Methyl-1-[[3,3a,12,13,14,15,16,16a-octahydro-8-methoxy-13,16-dioxo-14-(phenylmethyl)-5,9-metheno-9H-pyrrolo[3,2-b][1,5,8]oxadiazacyclopentadecin-1(2H)-yl]carbonyl]propyl]propanamide, 9ciHMDB

    Chemical Formlia

    C33H43N5O6 Average Molecliar Weight

    605.7244 Monoisotopic Molecliar Weight

    605.321334133 IUPAC Name

    (Z)-N-{1-[(8E,11E,13E)-10-benzyl-8,11-dihydroxy-16-methoxy-2-oxa-6,9,12-triazatricyclo[13.3.1.0³,⁷]nonadeca-1(18),8,11,13,15(19),16-hexaen-6-yl]-3-methyl-1-oxobutan-2-yl}-2-(dimethylamino)propimidic acid Traditional Name

    (Z)-N-{1-[(8E,11E,13E)-10-benzyl-8,11-dihydroxy-16-methoxy-2-oxa-6,9,12-triazatricyclo[13.3.1.0³,⁷]nonadeca-1(18),8,11,13,15(19),16-hexaen-6-yl]-3-methyl-1-oxobutan-2-yl}-2-(dimethylamino)propimidic acid CAS Registry Number

    52659-55-9 SMILES

    COC1=CC=C2OC3CCN(C3C(O)=N/C(CC3=CC=CC=C3)C(O)=N/C=C/C1=C2)C(=O)C(N=C(/O)C(C)N(C)C)C(C)C

    InChI Identifier

    InChI=1S/C33H43N5O6/c1-20(2)28(36-30(39)21(3)37(4)5)33(42)38-17-15-27-29(38)32(41)35-25(18-22-10-8-7-9-11-22)31(40)34-16-14-23-19-24(44-27)12-13-26(23)43-6/h7-14,16,19-21,25,27-29H,15,17-18H2,1-6H3,(H,34,40)(H,35,41)(H,36,39)/b16-14+

    InChI Key

    KLYKBXVHBJWDJF-JQIJEIRASA-N Chemical Taxonomy Description

    This compound belongs to the class of chemical entities known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Kingdom

    Chemical entities Super Class

    Organic compounds Class

    Organic acids and derivatives Sub Class

    Carboxylic acids and derivatives Direct Parent

    Oligopeptides Alternative Parents

  • Cyclic peptides
  • Valine and derivatives
  • Macrolactams
  • N-acyl-alpha amino acids and derivatives
  • Alpha amino acid amides
  • Alanine and derivatives
  • Anisoles
  • N-acylpyrrolidines
  • Alkyl aryl ethers
  • Benzene and substituted derivatives
  • Tertiary carboxylic acid amides
  • Lactams
  • Trialkylamines
  • Secondary carboxylic acid amides
  • Azacyclic compounds
  • Oxacyclic compounds
  • Hydrocarbon derivatives
  • Organopnictogen compounds
  • Carbonyl compounds
  • Organic oxides
  • Substituents

  • Alpha-oligopeptide
  • Cyclic alpha peptide
  • Valine or derivatives
  • Macrolactam
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Alanine or derivatives
  • Alpha-amino acid or derivatives
  • Anisole
  • N-acylpyrrolidine
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Amino acid or derivatives
  • Lactam
  • Carboxamide group
  • Tertiary aliphatic amine
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Ether
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic nitrogen compound
  • Organonitrogen compound
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point205 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.013 mg/mLALOGPS logP3.16ALOGPS logP1.99ChemAxon logS-4.7ALOGPS pKa (Strongest Acidic)4.56ChemAxon pKa (Strongest Basic)8.05ChemAxon Physiological Charge-2ChemAxon Hydrogen Acceptor Count10ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area139.78 Å2ChemAxon Rotatable Bond Count8ChemAxon Refractivity167.49 m3·mol-1ChemAxon Polarizability63.93 Å3ChemAxon Number of Rings4ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000394 KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29333 Metagene Link

    HMDB29333 METLIN ID

    Not Available PubChem Compound

    51029223 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: BI-9564

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 7608899