Chlorhexidine

Common Name

Chlorhexidine Description

Chlorhexidine is only found in individuals that have used or taken this drug. It is a disinfectant and topical anti-infective agent used also as mouthwash to prevent oral plaque. [PubChem]Chlorhexidines antimicrobial effects are associated with the attractions between chlorhexidine (cation) and negatively charged bacterial cells. After chlorhexidine is absorpted onto the organisms cell wall, it disrupts the integrity of the cell membrane and causes the leakage of intracellliar components of the organisms. Structure

Synonyms

Value Source 1,1'-Hexamethylene bis(5-(P-chlorophenyl)biguanide)ChEBI N,N'-bis(4-chlorophenyl)-3,12-diimino-2,4,11,13-tetraazatetradecanediimidamideChEBI CloresidinaHMDB

Chemical Formlia

C22H30Cl2N10 Average Molecliar Weight

505.447 Monoisotopic Molecliar Weight

504.203196424 IUPAC Name

N-(4-chlorophenyl)-1-3-(6-{N-[3-(4-chlorophenyl)carbamimidamidomethanimidoyl]amino}hexyl)carbamimidamidomethanimidamide Traditional Name

chlorhexidine CAS Registry Number

55-56-1 SMILES

ClC1=CC=C(NC(=N)NC(=N)NCCCCCCNC(=N)NC(=N)NC2=CC=C(Cl)C=C2)C=C1

InChI Identifier

InChI=1S/C22H30Cl2N10/c23-15-5-9-17(10-6-15)31-21(27)33-19(25)29-13-3-1-2-4-14-30-20(26)34-22(28)32-18-11-7-16(24)8-12-18/h5-12H,1-4,13-14H2,(H5,25,27,29,31,33)(H5,26,28,30,32,34)

InChI Key

GHXZTYHSJHQHIJ-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of organic compounds known as chlorobenzenes. These are compounds containing one or more chlorine atoms attached to a benzene moiety. Kingdom

Organic compounds Super Class

Benzenoids Class

Benzene and substituted derivatives Sub Class

Halobenzenes Direct Parent

Chlorobenzenes Alternative Parents

  • Biguanides
  • Aryl chlorides
  • Propargyl-type 1,3-dipolar organic compounds
  • Carboximidamides
  • Organopnictogen compounds
  • Organochlorides
  • Imines
  • Hydrocarbon derivatives
  • Substituents

  • Biguanide
  • Chlorobenzene
  • Aryl chloride
  • Aryl halide
  • Guanidine
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Carboximidamide
  • Organohalogen compound
  • Imine
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organochloride
  • Organonitrogen compound
  • Organopnictogen compound
  • Aromatic homomonocyclic compound
  • Molecliar Framework

    Aromatic homomonocyclic compounds External Descriptors

  • monochlorobenzenes (CHEBI:3614 )
  • biguanides (CHEBI:3614 )
  • Ontology Status

    Detected but not Quantified Origin

  • Drug
  • Biofunction

  • Anti-Bacterial Agents
  • Anti-Infective Agents, Local
  • Anti-Infectives
  • Disinfectants
  • Mouthwashes
  • Application

  • Pharmaceutical
  • Cellliar locations

  • Cytoplasm
  • Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting Point134 °CNot Available Boiling PointNot AvailableNot Available Water Solubility2.61e-02 g/LNot Available LogP3Not Available

    Predicted Properties

    Property Value Source Water Solubility0.026 mg/mLALOGPS logP2.71ALOGPS logP4.51ChemAxon logS-4.3ALOGPS pKa (Strongest Basic)10.52ChemAxon Physiological Charge4ChemAxon Hydrogen Acceptor Count10ChemAxon Hydrogen Donor Count10ChemAxon Polar Surface Area167.58 Å2ChemAxon Rotatable Bond Count9ChemAxon Refractivity181.71 m3·mol-1ChemAxon Polarizability54.6 Å3ChemAxon Number of Rings2ChemAxon Bioavailability0ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Biofluid Locations

  • Blood
  • Saliva
  • Urine
  • Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodExpected but not Quantified Not AvailableNot AvailableTaking drug identified by DrugBank entry DB00878

  • 21059682
  • details SalivaDetected but not Quantified Adlit (>18 years old)Not SpecifiedNormal

  • 12097436
  • details UrineExpected but not Quantified Not AvailableNot AvailableTaking drug identified by DrugBank entry DB00878

  • 21059682
  • details

    Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    DB00878 DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    Not Available KNApSAcK ID

    Not Available Chemspider ID

    2612 KEGG Compound ID

    C06902 BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Chlorhexidine NuGOwiki Link

    HMDB15016 Metagene Link

    HMDB15016 METLIN ID

    Not Available PubChem Compound

    2713 PDB ID

    Not Available ChEBI ID

    3614

    Product: Pixantrone (dimaleate)

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References Not Available

    Enzymes

    General function:
    Involved in histamine N-methyltransferase activity
    Specific function:
    Inactivates histamine by N-methylation. Plays an important role in degrading histamine and in regulating the airway response to histamine.
    Gene Name:
    HNMT
    Uniprot ID:
    P50135
    Molecular weight:
    6045.9
    References
    1. Harle DG, Baldo BA: Structural features of potent inhibitors of rat kidney histamine N-methyltransferase. Biochem Pharmacol. 1988 Feb 1;37(3):385-8. [PubMed:3337739 ]

    PMID: 2922062