Urolithin A-3-O-glucuronide

Common Name

Urolithin A-3-O-glucuronide Description

Urolithin A glucuronide is a biomarker of nut consumption in urine. Structure

MOLSDFPDBSMILESInChI

Structure for HMDB29222 (Urolithin A-3-O-glucuronide)

Synonyms

Value Source Urolithin a-O-glucuronideHMDB

Chemical Formlia

C19H16O10 Average Molecliar Weight

404.3243 Monoisotopic Molecliar Weight

404.074346732 IUPAC Name

3,4,5-trihydroxy-6-({8-hydroxy-6-oxo-6H-benzo[c]chromen-3-yl}oxy)oxane-2-carboxylic acid Traditional Name

3,4,5-trihydroxy-6-({8-hydroxy-6-oxobenzo[c]chromen-3-yl}oxy)oxane-2-carboxylic acid CAS Registry Number

Not Available SMILES

OC1C(O)C(OC2=CC=C3C(OC(=O)C4=CC(O)=CC=C34)=C2)OC(C1O)C(O)=O

InChI Identifier

InChI=1S/C19H16O10/c20-7-1-3-9-10-4-2-8(6-12(10)28-18(26)11(9)5-7)27-19-15(23)13(21)14(22)16(29-19)17(24)25/h1-6,13-16,19-23H,(H,24,25)

InChI Key

KXBXNRJGUDTJQS-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic oxygen compounds Sub Class

Organooxygen compounds Direct Parent

Phenolic glycosides Alternative Parents

  • O-glucuronides
  • Coumarins and derivatives
  • Isocoumarins and derivatives
  • O-glycosyl compounds
  • 2-benzopyrans
  • 1-benzopyrans
  • Pyranones and derivatives
  • 1-hydroxy-2-unsubstituted benzenoids
  • Beta hydroxy acids and derivatives
  • Oxanes
  • Monosaccharides
  • Heteroaromatic compounds
  • Lactones
  • Secondary alcohols
  • Polyols
  • Monocarboxylic acids and derivatives
  • Carboxylic acids
  • Acetals
  • Oxacyclic compounds
  • Carbonyl compounds
  • Hydrocarbon derivatives
  • Organic oxides
  • Substituents

  • Phenolic glycoside
  • 1-o-glucuronide
  • O-glucuronide
  • Glucuronic acid or derivatives
  • Coumarin
  • Isocoumarin
  • O-glycosyl compound
  • 2-benzopyran
  • 1-benzopyran
  • Benzopyran
  • Pyranone
  • Beta-hydroxy acid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Pyran
  • Oxane
  • Monosaccharide
  • Hydroxy acid
  • Heteroaromatic compound
  • Secondary alcohol
  • Lactone
  • Polyol
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Acetal
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Alcohol
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Detected but not Quantified Origin

    Not Available Biofunction

  • Waste products
  • Application

    Not Available Cellliar locations

    Not Available Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility1.87 mg/mLALOGPS logP0.56ALOGPS logP0.37ChemAxon logS-2.3ALOGPS pKa (Strongest Acidic)3.19ChemAxon pKa (Strongest Basic)-3.7ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count9ChemAxon Hydrogen Donor Count5ChemAxon Polar Surface Area162.98 Å2ChemAxon Rotatable Bond Count3ChemAxon Refractivity92.91 m3·mol-1ChemAxon Polarizability37.93 Å3ChemAxon Number of Rings4ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

    Not Available Biofluid Locations

  • Blood
  • Urine
  • Tissue Location

  • Kidney
  • Liver
  • Pathways

    Not Available Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodExpected but not Quantified Not AvailableNot AvailableNormal

  • details UrineDetected but not Quantified Adlit (>18 years old)Male

    Normal

  • 22827565
  • details

    Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    Not Available KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29222 Metagene Link

    HMDB29222 METLIN ID

    Not Available PubChem Compound

    Not Available PDB ID

    Not Available ChEBI ID

    Not Available

    Product: KPT-8602 (Z-isomer)

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References Not Available

    PMID: 17552992

    Urolithin A-3-O-glucuronide

    Common Name

    Urolithin A-3-O-glucuronide Description

    Urolithin A glucuronide is a biomarker of nut consumption in urine. Structure

    MOLSDFPDBSMILESInChI

    Structure for HMDB29222 (Urolithin A-3-O-glucuronide)

    Synonyms

    Value Source Urolithin a-O-glucuronideHMDB

    Chemical Formlia

    C19H16O10 Average Molecliar Weight

    404.3243 Monoisotopic Molecliar Weight

    404.074346732 IUPAC Name

    3,4,5-trihydroxy-6-({8-hydroxy-6-oxo-6H-benzo[c]chromen-3-yl}oxy)oxane-2-carboxylic acid Traditional Name

    3,4,5-trihydroxy-6-({8-hydroxy-6-oxobenzo[c]chromen-3-yl}oxy)oxane-2-carboxylic acid CAS Registry Number

    Not Available SMILES

    OC1C(O)C(OC2=CC=C3C(OC(=O)C4=CC(O)=CC=C34)=C2)OC(C1O)C(O)=O

    InChI Identifier

    InChI=1S/C19H16O10/c20-7-1-3-9-10-4-2-8(6-12(10)28-18(26)11(9)5-7)27-19-15(23)13(21)14(22)16(29-19)17(24)25/h1-6,13-16,19-23H,(H,24,25)

    InChI Key

    KXBXNRJGUDTJQS-UHFFFAOYSA-N Chemical Taxonomy Description

    This compound belongs to the class of chemical entities known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. Kingdom

    Chemical entities Super Class

    Organic compounds Class

    Organic oxygen compounds Sub Class

    Organooxygen compounds Direct Parent

    Phenolic glycosides Alternative Parents

  • O-glucuronides
  • Coumarins and derivatives
  • Isocoumarins and derivatives
  • O-glycosyl compounds
  • 2-benzopyrans
  • 1-benzopyrans
  • Pyranones and derivatives
  • 1-hydroxy-2-unsubstituted benzenoids
  • Beta hydroxy acids and derivatives
  • Oxanes
  • Monosaccharides
  • Heteroaromatic compounds
  • Lactones
  • Secondary alcohols
  • Polyols
  • Monocarboxylic acids and derivatives
  • Carboxylic acids
  • Acetals
  • Oxacyclic compounds
  • Carbonyl compounds
  • Hydrocarbon derivatives
  • Organic oxides
  • Substituents

  • Phenolic glycoside
  • 1-o-glucuronide
  • O-glucuronide
  • Glucuronic acid or derivatives
  • Coumarin
  • Isocoumarin
  • O-glycosyl compound
  • 2-benzopyran
  • 1-benzopyran
  • Benzopyran
  • Pyranone
  • Beta-hydroxy acid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Pyran
  • Oxane
  • Monosaccharide
  • Hydroxy acid
  • Heteroaromatic compound
  • Secondary alcohol
  • Lactone
  • Polyol
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Acetal
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Alcohol
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Detected but not Quantified Origin

    Not Available Biofunction

  • Waste products
  • Application

    Not Available Cellliar locations

    Not Available Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility1.87 mg/mLALOGPS logP0.56ALOGPS logP0.37ChemAxon logS-2.3ALOGPS pKa (Strongest Acidic)3.19ChemAxon pKa (Strongest Basic)-3.7ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count9ChemAxon Hydrogen Donor Count5ChemAxon Polar Surface Area162.98 Å2ChemAxon Rotatable Bond Count3ChemAxon Refractivity92.91 m3·mol-1ChemAxon Polarizability37.93 Å3ChemAxon Number of Rings4ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

    Not Available Biofluid Locations

  • Blood
  • Urine
  • Tissue Location

  • Kidney
  • Liver
  • Pathways

    Not Available Normal Concentrations

    Biofluid Status Value Age Sex Condition Reference Details BloodExpected but not Quantified Not AvailableNot AvailableNormal

  • details UrineDetected but not Quantified Adlit (>18 years old)Male

    Normal

  • 22827565
  • details

    Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    Not Available KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29222 Metagene Link

    HMDB29222 METLIN ID

    Not Available PubChem Compound

    Not Available PDB ID

    Not Available ChEBI ID

    Not Available

    Product: KPT-8602 (Z-isomer)

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References Not Available

    PMID: 17552992