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Serinyl-Proline

July 21, 2017
Common Name

Serinyl-Proline Description

Serinyl-Proline is a dipeptide composed of serine and proline. It is an incomplete breakdown product of protein digestion or protein catabolism. Some dipeptides are known to have physiological or cell-signaling effects although most are simply short-lived intermediates on their way to specific amino acid degradation pathways following further proteolysis. This dipeptide has not yet been identified in human tissues or biofluids and so it is classified as an Expected metabolite. Structure

MOLSDF3D-SDFPDBSMILESInChI View 3D Structure

Structure for HMDB29047 (Serinyl-Proline)

Synonyms

Value Source L-Serinyl-L-prolineHMDB S-P DipeptideHMDB Ser-proHMDB Serine proline dipeptideHMDB Serine-proline dipeptideHMDB SerinylprolineHMDB SP DipeptideHMDB Seryl-prolineMeSH

Chemical Formlia

C8H14N2O4 Average Molecliar Weight

202.2078 Monoisotopic Molecliar Weight

202.095356946 IUPAC Name

1-(2-amino-3-hydroxypropanoyl)pyrrolidine-2-carboxylic acid Traditional Name

1-(2-amino-3-hydroxypropanoyl)pyrrolidine-2-carboxylic acid CAS Registry Number

Not Available SMILES

NC(CO)C(=O)N1CCCC1C(O)=O

InChI Identifier

InChI=1S/C8H14N2O4/c9-5(4-11)7(12)10-3-1-2-6(10)8(13)14/h5-6,11H,1-4,9H2,(H,13,14)

InChI Key

WBAXJMCUFIXCNI-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of chemical entities known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond. Kingdom

Chemical entities Super Class

Organic compounds Class

Organic acids and derivatives Sub Class

Carboxylic acids and derivatives Direct Parent

Dipeptides Alternative Parents

  • Proline and derivatives
  • N-acyl-alpha amino acids
  • Alpha amino acid amides
  • Pyrrolidine carboxylic acids
  • N-acylpyrrolidines
  • Tertiary carboxylic acid amides
  • Amino acids
  • Azacyclic compounds
  • Carboxylic acids
  • Monocarboxylic acids and derivatives
  • Hydrocarbon derivatives
  • Organopnictogen compounds
  • Carbonyl compounds
  • Monoalkylamines
  • Primary alcohols
  • Organic oxides

    • Substituents

  • Alpha-dipeptide
  • N-acyl-alpha amino acid or derivatives
  • Proline or derivatives
  • N-acyl-alpha-amino acid
  • Alpha-amino acid amide
  • Alpha-amino acid or derivatives
  • N-acylpyrrolidine
  • Pyrrolidine carboxylic acid
  • Pyrrolidine carboxylic acid or derivatives
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Amino acid or derivatives
  • Carboxamide group
  • Amino acid
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Azacycle
  • Organoheterocyclic compound
  • Alcohol
  • Organonitrogen compound
  • Organooxygen compound
  • Primary alcohol
  • Primary amine
  • Primary aliphatic amine
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organopnictogen compound
  • Amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Aliphatic heteromonocyclic compound

    • Molecliar Framework

    Aliphatic heteromonocyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous

    • Biofunction

    Not Available Application

    Not Available Cellliar locations

    Not Available Physical Properties State

    Solid Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogP-4.15Extrapolated

    Predicted Properties

    Property Value Source Water Solubility180.0 mg/mLALOGPS logP-2.9ALOGPS logP-4.2ChemAxon logS-0.05ALOGPS pKa (Strongest Acidic)3.53ChemAxon pKa (Strongest Basic)7.84ChemAxon Physiological Charge0ChemAxon Hydrogen Acceptor Count5ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area103.86 Å2ChemAxon Rotatable Bond Count3ChemAxon Refractivity47.03 m3·mol-1ChemAxon Polarizability19.57 Å3ChemAxon Number of Rings1ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Not Available Biological Properties Cellliar Locations

    Not Available Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    Not Available KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29047 Metagene Link

    HMDB29047 METLIN ID

    Not Available PubChem Compound

    Not Available PDB ID

    Not Available ChEBI ID

    Not Available

    Product: RSV604 (racemate)

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. Oguri S, Amano K, Nakashita H, Nagata Y, Momonoki YS: Molecular structure and properties of lectin from tomato fruit. Biosci Biotechnol Biochem. 2008 Oct;72(10):2640-50. Epub 2008 Oct 7. [PubMed:18838808 ]
    2. Woessner JP, Molendijk AJ, van Egmond P, Klis FM, Goodenough UW, Haring MA: Domain conservation in several volvocalean cell wall proteins. Plant Mol Biol. 1994 Nov;26(3):947-60. [PubMed:8000007 ]
    3. Gal M, Edmonds KA, Milbradt AG, Takeuchi K, Wagner G: Speeding up direct (15)N detection: hCaN 2D NMR experiment. J Biomol NMR. 2011 Dec;51(4):497-504. doi: 10.1007/s10858-011-9580-7. Epub 2011 Oct 30. [PubMed:22038648 ]

    PMID: 19213917

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