Penmacric acid

Common Name

Penmacric acid Description

Penmacric acid is a constituent of the seeds of the famine feed Pentaclethra macrophylla.Penmacric acid belongs to the family of Alpha Amino Acids and Derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon)[1]. (Reference: [1] Amino Acid: http://en.wikipedia.org/wiki/Amino_acid). Structure

MOLSDFPDBSMILESInChI

Structure for HMDB29436 (Penmacric acid)

Synonyms

Value Source 3-(1-Aminocarboxymethyl)-2-pyrrolidone-5-carboxylic acidHMDB a-amino-5-Carboxy-2-oxo-3-pyrrolidineacetic acid, 9ciHMDB

Chemical Formlia

C7H10N2O5 Average Molecliar Weight

202.1647 Monoisotopic Molecliar Weight

202.05897144 IUPAC Name

4-[amino(carboxy)methyl]-5-oxopyrrolidine-2-carboxylic acid Traditional Name

4-[amino(carboxy)methyl]-5-oxopyrrolidine-2-carboxylic acid CAS Registry Number

55297-13-7 SMILES

NC(C1CC(NC1=O)C(O)=O)C(O)=O

InChI Identifier

InChI=1S/C7H10N2O5/c8-4(7(13)14)2-1-3(6(11)12)9-5(2)10/h2-4H,1,8H2,(H,9,10)(H,11,12)(H,13,14)

InChI Key

QEFCFJFZZLNSPP-UHFFFAOYSA-N Chemical Taxonomy Classification

Not classified Ontology Status

Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility37.3 mg/mLALOGPS logP-3.5ALOGPS logP-4.4ChemAxon logS-0.73ALOGPS pKa (Strongest Acidic)1.66ChemAxon pKa (Strongest Basic)8.49ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count6ChemAxon Hydrogen Donor Count4ChemAxon Polar Surface Area129.72 Å2ChemAxon Rotatable Bond Count3ChemAxon Refractivity41.92 m3·mol-1ChemAxon Polarizability17.57 Å3ChemAxon Number of Rings1ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Positivesplash10-0a4r-0910000000-3600072b9506a8a1bde8View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Positivesplash10-0bt9-1900000000-a2d5df2e0c14e36c89fdView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Positivesplash10-03e9-9800000000-0beb1edaa0123037564bView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Negativesplash10-0udi-2970000000-b9a25352f198cb20d40bView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Negativesplash10-00e9-7910000000-b74949b56d8634b250a8View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Negativesplash10-008c-9300000000-f68d59acd2ce97d155a6View in MoNA

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000541 KNApSAcK ID

    Not Available Chemspider ID

    471952 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29436 Metagene Link

    HMDB29436 METLIN ID

    Not Available PubChem Compound

    541973 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: P7C3-A20

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 9400006

    Penmacric acid

    Common Name

    Penmacric acid Description

    Penmacric acid is a constituent of the seeds of the famine feed Pentaclethra macrophylla.Penmacric acid belongs to the family of Alpha Amino Acids and Derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon)[1]. (Reference: [1] Amino Acid: http://en.wikipedia.org/wiki/Amino_acid). Structure

    MOLSDFPDBSMILESInChI

    Structure for HMDB29436 (Penmacric acid)

    Synonyms

    Value Source 3-(1-Aminocarboxymethyl)-2-pyrrolidone-5-carboxylic acidHMDB a-amino-5-Carboxy-2-oxo-3-pyrrolidineacetic acid, 9ciHMDB

    Chemical Formlia

    C7H10N2O5 Average Molecliar Weight

    202.1647 Monoisotopic Molecliar Weight

    202.05897144 IUPAC Name

    4-[amino(carboxy)methyl]-5-oxopyrrolidine-2-carboxylic acid Traditional Name

    4-[amino(carboxy)methyl]-5-oxopyrrolidine-2-carboxylic acid CAS Registry Number

    55297-13-7 SMILES

    NC(C1CC(NC1=O)C(O)=O)C(O)=O

    InChI Identifier

    InChI=1S/C7H10N2O5/c8-4(7(13)14)2-1-3(6(11)12)9-5(2)10/h2-4H,1,8H2,(H,9,10)(H,11,12)(H,13,14)

    InChI Key

    QEFCFJFZZLNSPP-UHFFFAOYSA-N Chemical Taxonomy Classification

    Not classified Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Cytoplasm
  • Extracellliar
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting PointNot AvailableNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility37.3 mg/mLALOGPS logP-3.5ALOGPS logP-4.4ChemAxon logS-0.73ALOGPS pKa (Strongest Acidic)1.66ChemAxon pKa (Strongest Basic)8.49ChemAxon Physiological Charge-1ChemAxon Hydrogen Acceptor Count6ChemAxon Hydrogen Donor Count4ChemAxon Polar Surface Area129.72 Å2ChemAxon Rotatable Bond Count3ChemAxon Refractivity41.92 m3·mol-1ChemAxon Polarizability17.57 Å3ChemAxon Number of Rings1ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Positivesplash10-0a4r-0910000000-3600072b9506a8a1bde8View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Positivesplash10-0bt9-1900000000-a2d5df2e0c14e36c89fdView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Positivesplash10-03e9-9800000000-0beb1edaa0123037564bView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, Negativesplash10-0udi-2970000000-b9a25352f198cb20d40bView in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, Negativesplash10-00e9-7910000000-b74949b56d8634b250a8View in MoNA Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, Negativesplash10-008c-9300000000-f68d59acd2ce97d155a6View in MoNA

    Biological Properties Cellliar Locations

  • Cytoplasm
  • Extracellliar
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000541 KNApSAcK ID

    Not Available Chemspider ID

    471952 KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29436 Metagene Link

    HMDB29436 METLIN ID

    Not Available PubChem Compound

    541973 PDB ID

    Not Available ChEBI ID

    Not Available

    Product: P7C3-A20

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 9400006