Garcinone A

Common Name

Garcinone A Description

Garcinone A is found in fruits. Garcinone A is a constituent of Garcinia mangostana (mangosteen).Garcinone a belongs to the family of Xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Structure

MOLSDFPDBSMILESInChI

Structure for HMDB29509 (Garcinone A)

Synonyms

Not Available Chemical Formlia

C23H24O5 Average Molecliar Weight

380.4337 Monoisotopic Molecliar Weight

380.162373878 IUPAC Name

1,3,6-trihydroxy-2,4-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one Traditional Name

1,3,6-trihydroxy-2,4-bis(3-methylbut-2-en-1-yl)xanthen-9-one CAS Registry Number

76996-29-7 SMILES

CC(C)=CCC1=C(O)C2=C(OC3=C(C=CC(O)=C3)C2=O)C(CC=C(C)C)=C1O

InChI Identifier

InChI=1S/C23H24O5/c1-12(2)5-8-16-20(25)17(9-6-13(3)4)23-19(22(16)27)21(26)15-10-7-14(24)11-18(15)28-23/h5-7,10-11,24-25,27H,8-9H2,1-4H3

InChI Key

HHHZYUKPVCUMDR-UHFFFAOYSA-N Chemical Taxonomy Description

This compound belongs to the class of organic compounds known as 4-prenylated xanthones. These are organic compounds containing a C5-isoprenoid group linked to a xanthone moiety at the 4-position. Xanthone is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring that carries a ketone group. Kingdom

Organic compounds Super Class

Organoheterocyclic compounds Class

Benzopyrans Sub Class

1-benzopyrans Direct Parent

4-prenylated xanthones Alternative Parents

  • 2-prenylated xanthones
  • Chromones
  • Resorcinols
  • Pyranones and derivatives
  • Vinylogous acids
  • Heteroaromatic compounds
  • Polyols
  • Oxacyclic compounds
  • Hydrocarbon derivatives
  • Substituents

  • 4-prenylated xanthone
  • 2-prenylated xanthone
  • Chromone
  • Resorcinol
  • Pyranone
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Vinylogous acid
  • Polyol
  • Oxacycle
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point224 – 225 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.007 mg/mLALOGPS logP4.4ALOGPS logP6.16ChemAxon logS-4.7ALOGPS pKa (Strongest Acidic)7.04ChemAxon pKa (Strongest Basic)-4.2ChemAxon Physiological Charge0ChemAxon Hydrogen Acceptor Count4ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area86.99 Å2ChemAxon Rotatable Bond Count4ChemAxon Refractivity111.24 m3·mol-1ChemAxon Polarizability41.99 Å3ChemAxon Number of Rings3ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000644 KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29509 Metagene Link

    HMDB29509 METLIN ID

    Not Available PubChem Compound

    Not Available PDB ID

    Not Available ChEBI ID

    Not Available

    Product: (RS)-MCPG

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 9219921

    Garcinone A

    Common Name

    Garcinone A Description

    Garcinone A is found in fruits. Garcinone A is a constituent of Garcinia mangostana (mangosteen).Garcinone a belongs to the family of Xanthones. These are polycyclic aromatic compounds containing a xanthene moiety conjugated to a ketone group at carbon 9. Structure

    MOLSDFPDBSMILESInChI

    Structure for HMDB29509 (Garcinone A)

    Synonyms

    Not Available Chemical Formlia

    C23H24O5 Average Molecliar Weight

    380.4337 Monoisotopic Molecliar Weight

    380.162373878 IUPAC Name

    1,3,6-trihydroxy-2,4-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one Traditional Name

    1,3,6-trihydroxy-2,4-bis(3-methylbut-2-en-1-yl)xanthen-9-one CAS Registry Number

    76996-29-7 SMILES

    CC(C)=CCC1=C(O)C2=C(OC3=C(C=CC(O)=C3)C2=O)C(CC=C(C)C)=C1O

    InChI Identifier

    InChI=1S/C23H24O5/c1-12(2)5-8-16-20(25)17(9-6-13(3)4)23-19(22(16)27)21(26)15-10-7-14(24)11-18(15)28-23/h5-7,10-11,24-25,27H,8-9H2,1-4H3

    InChI Key

    HHHZYUKPVCUMDR-UHFFFAOYSA-N Chemical Taxonomy Description

    This compound belongs to the class of organic compounds known as 4-prenylated xanthones. These are organic compounds containing a C5-isoprenoid group linked to a xanthone moiety at the 4-position. Xanthone is a tricyclic compound made up of two benzene rings linearly fused to each other through a pyran ring that carries a ketone group. Kingdom

    Organic compounds Super Class

    Organoheterocyclic compounds Class

    Benzopyrans Sub Class

    1-benzopyrans Direct Parent

    4-prenylated xanthones Alternative Parents

  • 2-prenylated xanthones
  • Chromones
  • Resorcinols
  • Pyranones and derivatives
  • Vinylogous acids
  • Heteroaromatic compounds
  • Polyols
  • Oxacyclic compounds
  • Hydrocarbon derivatives
  • Substituents

  • 4-prenylated xanthone
  • 2-prenylated xanthone
  • Chromone
  • Resorcinol
  • Pyranone
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Vinylogous acid
  • Polyol
  • Oxacycle
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
  • Molecliar Framework

    Aromatic heteropolycyclic compounds External Descriptors

    Not Available Ontology Status

    Expected but not Quantified Origin

  • Endogenous
  • Food
  • Biofunction

    Not Available Application

  • Nutrient
  • Cellliar locations

  • Membrane
  • Physical Properties State

    Not Available Experimental Properties

    Property Value Reference Melting Point224 – 225 °CNot Available Boiling PointNot AvailableNot Available Water SolubilityNot AvailableNot Available LogPNot AvailableNot Available

    Predicted Properties

    Property Value Source Water Solubility0.007 mg/mLALOGPS logP4.4ALOGPS logP6.16ChemAxon logS-4.7ALOGPS pKa (Strongest Acidic)7.04ChemAxon pKa (Strongest Basic)-4.2ChemAxon Physiological Charge0ChemAxon Hydrogen Acceptor Count4ChemAxon Hydrogen Donor Count3ChemAxon Polar Surface Area86.99 Å2ChemAxon Rotatable Bond Count4ChemAxon Refractivity111.24 m3·mol-1ChemAxon Polarizability41.99 Å3ChemAxon Number of Rings3ChemAxon Bioavailability1ChemAxon Rlie of FiveYesChemAxon Ghose FilterYesChemAxon Vebers RlieYesChemAxon MDDR-like RlieYesChemAxon

    Spectra Spectra

    Spectrum Type Description Splash Key Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, PositiveNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 10V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 20V, NegativeNot Available Predicted LC-MS/MS

    Predicted LC-MS/MS Spectrum – 40V, NegativeNot Available

    Biological Properties Cellliar Locations

  • Membrane
  • Biofluid Locations

    Not Available Tissue Location

    Not Available Pathways

    Not Available Normal Concentrations Not Available Abnormal Concentrations

    Not Available Associated Disorders and Diseases Disease References

    None Associated OMIM IDs

    None External Links DrugBank ID

    Not Available DrugBank Metabolite ID

    Not Available Phenol Explorer Compound ID

    Not Available Phenol Explorer Metabolite ID

    Not Available FoodDB ID

    FDB000644 KNApSAcK ID

    Not Available Chemspider ID

    Not Available KEGG Compound ID

    Not Available BioCyc ID

    Not Available BiGG ID

    Not Available Wikipedia Link

    Not Available NuGOwiki Link

    HMDB29509 Metagene Link

    HMDB29509 METLIN ID

    Not Available PubChem Compound

    Not Available PDB ID

    Not Available ChEBI ID

    Not Available

    Product: (RS)-MCPG

    References Synthesis Reference Not Available Material Safety Data Sheet (MSDS) Not Available General References
    1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

    PMID: 9219921